This is the index to a running series that reads federal spending one program at a time. The method is always the same, borrowed from the way the Government Accountability Office and the Congressional Research Service read a budget: take a program most people have never heard of, find what it actually costs from a primary source, find the honest efficiency critique, find the honest public-good defense, and let the two verdicts sit next to each other instead of picking one for a headline. Almost every figure links to a government report, a statute, or an agency filing. Here is the whole set, grouped by what kind of money problem each one is.
The single idea underneath all of it is that efficiency and access are different yardsticks, and most fights about public money are really fights about which yardstick to use. A program can fail one and pass the other. Which number you lead with is usually a decision you made before you opened the spreadsheet.
Rural lifelines: the cost-per-unit versus cost-per-community problem
These are the programs that look wasteful measured per passenger or per rider and look essential measured per community, because the thing they buy is a connection that the market will not provide at any price.
- Essential Air Service: subsidized flights to 183 small and remote communities, sometimes over 1,900 dollars a passenger, and the roadless Alaskan villages where it is the only way out.
- The Alaska Bypass Mail subsidy: the postal freight system that keeps groceries flowing to roadless Alaska, and quietly makes the passenger flights on the same planes viable.
- The Alaska Marine Highway: the state ferry that recovers only about a third of its cost from fares and is the only road to Juneau, a state capital you cannot drive to.
- Amtrak's long-distance trains: the routes that lose the most money per passenger in the system and are the only public transit for hundreds of small towns.
- PILT and Secure Rural Schools: two programs that pay counties for the federal land inside their borders that they are not allowed to tax.
Health care: the safety net and the spread
The federal government pays for rural and safety-net medicine through mechanics that look strange until you see what they hold together.
- Critical Access Hospitals: the hospitals Medicare pays 101 percent of their own reported cost, because a per-case rate would close them and leave counties without an emergency room.
- The 340B Drug Pricing Program: the mandated drug discount that moves tens of billions of dollars, is captured as revenue by large nonprofit systems that also run enormous investment portfolios, and divides sharply on whether the savings reach patients.
- Federally Qualified Health Centers: the community clinics that deliver primary care to about one American in eleven, on a sliding scale, funded through a grant stream that keeps hitting a cliff.
Insurance and trust funds in the red
Programs designed to pool a risk the private market will not, which end up owing the Treasury money by design or by neglect.
- The National Flood Insurance Program: the only flood insurer most Americans can buy, deep in debt to the Treasury, repeatedly rebuilding the same flooded houses.
- The Black Lung Disability Trust Fund: a coal tax that has never quite covered the disabled miners it pays, borrowing from the Treasury nearly every year while the disease resurges.
- The Pension Benefit Guaranty Corporation: the federal backstop behind private pensions, self-funded on one side and rescued by a taxpayer bailout on the other.
The nuclear enterprise: the most expensive corners of the budget
The nuclear-weapons and nuclear-waste complex is where public money meets the highest stakes and some of the largest failures.
- The Office of Secure Transportation: the unmarked armored fleet and armed federal agents that move nuclear weapons across the country, 140 million miles without a release, for about 450 million dollars a year.
- FOGBANK: the classified warhead material the government forgot how to make, and paid tens of millions and a year to relearn.
- The Nuclear Waste Fund and Yucca Mountain: a 49-billion-dollar account for a repository that was never built, while taxpayers separately pay billions in damages.
- The MOX Fuel Fabrication Facility: a plant to burn bomb plutonium into reactor fuel that consumed 7.6 billion dollars and was cancelled before it processed a gram.
- The Uranium Processing Facility: the replacement plant at Y-12 that was designed too small to fit its own equipment, then redesigned at enormous cost.
- The WIPP accident: how the wrong absorbent in a single waste drum shut the nation's only operating nuclear-waste repository for three years.
Wildfire: the cost curve and the vendors behind it
- Who pays to put out the fire: federal suppression costs that crossed a billion dollars in 2000 and now run several times that, and the interagency machine that spends them.
- Who gets paid to fight the fire: the private air-tanker operators, the sole-source retardant contract, and the contractors who receive the suppression dollars.
- Who owns the firefighting fleet: the private-equity, public-market, and debt money behind the tankers, and the military and ex-agency service that runs them, including a founder who is now a sitting United States senator.
Boondoggles and the watchdog that counts them
The programs above include several honest failures, and there are others whose mission was real but whose execution was not. Several of these are documented by the agencies' own Inspectors General or by the GAO, which is the point: the government indicts itself here, and both the failure and the mission behind it are shown.
- The VA electronic health record modernization: a multibillion-dollar Oracle-Cerner rollout meant to unify military and veteran records, paused after cost growth and patient-safety failures.
- The FBI case files that never went digital: Virtual Case File, scrapped after roughly 170 million dollars, and its late, over-budget successor Sentinel, the decade it took the bureau to move off paper.
- NPOESS, the weather satellite that doubled in cost: a joint civilian and military program that grew from about 6.5 billion dollars toward 15 billion, breached the Nunn-McCurdy limits, and was torn up and rebuilt as two separate programs.
- The DEA and 4 billion dollars in cash: a decade of civil-forfeiture cash seizures, roughly 3.2 billion of it forfeited with no criminal charge, and the Inspector General finding that the agency rarely tracked whether the seizures advanced any case.
- Operation Fast and Furious: the ATF gun-walking operation that put roughly 2,000 firearms into trafficking channels, two of them found where a Border Patrol agent was killed.
- The GAO High-Risk List and improper payments: the congressional watchdog behind most of these stories, the list of program areas most vulnerable to waste, and the roughly 160 to 240 billion dollars a year the government pays out improperly.
- The Pentagon that has never passed an audit: the only major federal department without a clean opinion, seven straight disclaimers meaning its books cannot be verified, which is not the same thing as money proven missing.
The nuclear pieces above, the MOX plant, the Uranium Processing Facility, and the WIPP accident, are boondoggles too, filed by subject rather than by failure.
Spies, satellites, and the black budget
The most secret corners of the budget are also the hardest to oversee. These are programs funded through classified or covert channels, where the dollar figures are estimates rather than audited numbers, and where the failure and the mission are both real. Every figure here is sourced to what the record actually shows.
- Future Imagery Architecture: the reconnaissance-satellite program that spent an estimated 10 billion dollars on an optical satellite that was never built, cancelled in 2005 with only its radar half surviving.
- The spy agency headquarters Congress did not approve: the NRO's secret 300-million-dollar building and the roughly 1 to 3.8 billion dollars in unspent funds the oversight committees say they were never clearly told about.
- EnhancedView, the commercial imagery commitment: the roughly 7.3 billion dollars the map agency committed to buying commercial satellite imagery, and the question of whether it bought more capacity than it used.
- The NSA data centers and the electrical failures: the roughly 1.5-billion-dollar Utah Data Center whose arc-fault surges destroyed equipment and delayed its opening, and how the black budget builds through Military Construction while its mission money stays classified.
- Trailblazer and the cheaper one it passed over: the billion-dollar NSA data program that failed, the in-house alternative that was rejected, and the whistleblower prosecution that collapsed.
- How the CIA paid for its secret prisons: the more than 300 million dollars in non-personnel costs, the cash to host governments, and the 81 million to the contract psychologists, all funded through covert-action channels the public budget never showed.
- In-Q-Tel, the intelligence community's venture arm: how roughly 100 million dollars a year of public money flows through a private nonprofit into startups, from the mapping company that became Google Earth to Palantir, and the family of government venture arms cut from the same cloth.
Systems that failed and programs that were cancelled
The most common federal boondoggle is not exotic. It is a large modernization or a big-ticket acquisition, a contractor, years of cost growth, and a program that delivers little or nothing before it is cancelled or quietly written off.
- The census technology that failed, then recovered: the 2010 handheld computers that were scrapped for paper at a cost of billions, and the 2020 count that, unusually, came in under its own estimate.
- A billion dollars for nothing: the Air Force logistics system cancelled in 2012 after roughly 1.1 billion dollars with, in the service's own words, no significant military capability.
- Deepwater and the cutters that buckled: the Coast Guard patrol boats lengthened until their hulls deformed, removed from service at a loss of about 100 million dollars.
- The new Marine One that cost more than Air Force One: the VH-71 presidential helicopter cancelled in 2009 after billions, with no aircraft delivered.
- SBInet, the virtual border fence: nearly a billion dollars for about 53 miles of Arizona sensor towers that underperformed, cancelled in 2011.
- SPOT, the airport behavior-detection program: the roughly 900 million dollars TSA spent watching travelers for deception, on a method GAO said the science did not support.
- US-VISIT and the exit that was never finished: the biometric border-exit system Congress mandated for decades and billions, delivered at entry but never completed as designed.
Weapons and systems that never delivered
The largest single-program failures tend to be defense acquisitions: enormously ambitious systems, a contractor, years of cost growth, and a cancellation before anything reaches the field. Each figure below keeps the amount spent separate from the amount merely projected.
- The Army intelligence system soldiers did not want: DCGS-A, the fusion system units in Afghanistan found slow, and the court fight that forced the Army to consider commercial Palantir, a company cut from the same In-Q-Tel cloth.
- The air-traffic-control computers mostly thrown away: the FAA's 1990s modernization that wrote off about 1.5 billion dollars of the 2.6 billion it spent before it was restructured.
- DIMHRS, the payroll system that never paid anyone: about a billion dollars for a joint military personnel-and-pay system that was cancelled without ever running department-wide.
- BioWatch, the bioterror alarm that could not be trusted: well over a billion dollars on an air-sampler network that GAO and scientists said might not reliably detect an attack.
- The Airborne Laser, a 747 with a laser cannon: roughly 5 billion dollars for a demonstrator that hit test missiles in 2010 and was retired to the boneyard anyway.
- The A-12 stealth jet cancelled in 1991: about 2 billion dollars spent, no aircraft ever flown, and 23 years of litigation that reached the Supreme Court.
- Future Combat Systems: the Army's system of systems that spent roughly 18 billion dollars before its manned-vehicle core was cancelled in 2009.
Contaminated ground: the cleanups that outlive their deadlines
Some of the largest and slowest public-money commitments are not programs at all. They are messes the government made decades ago and is still paying to clean up, sometimes with the cleanup itself going wrong.
- Hanford and the vitrification plant: the most contaminated place in America, the leaking tanks beside the Columbia River, and the glass-making plant meant to lock the waste away that has run for decades and tens of billions of dollars without finishing the job.
- St. Louis radioactive waste: Manhattan Project waste that contaminated Coldwater Creek and sits in the West Lake Landfill, with an underground fire smouldering nearby.
- Hunters Point Naval Shipyard: the San Francisco shipyard whose radiological cleanup contractor was caught faking soil samples, two supervisors imprisoned, and a redevelopment left in doubt.
Toxic exposure and the delayed reckoning
A recurring pattern in the ledger: the government exposes its own people to a hazard in the course of their service, denies the connection for decades, and then pays a very large bill late, through a presumption or no-fault system that trades impossible individual proof for an administrable rule.
- Military burn pits and the PACT Act: the open-air waste fires of the post-9/11 wars, the years of denied claims, and the 2022 law that replaced impossible proof with presumption at a decade cost scored near 277 billion dollars.
- Agent Orange: the Vietnam herbicide, the decades-long fight, and the presumptive-disability system every later toxic-exposure law is built on.
- Camp Lejeune: the contaminated Marine base water, the two-statute remedy, and a claims wave that is still under one percent resolved.
- RECA and the atomic veterans: compensation for the downwinders and uranium workers the government irradiated with its own weapons tests, revived and expanded in 2025 after it briefly lapsed.
The other side of the ledger: the wage, and who indexes it
Public money is not only what the government spends. It is also what it collects and who it protects against inflation.
- COLA versus the merit raise: the government indexes its own obligations to the inflation number it prints, while the private wage is left to fall behind.
- The frozen paycheck on Capitol Hill: the one salary that could index itself and votes every year not to.
- When the bills rise faster than the raise: the practical playbook for the insurance, energy, and health costs that outrun a paycheck.
- Why a global health plan costs half a US one: the four things a cheap international premium hides.
The master hub
This index sits inside a larger one. The working ledgers reads the same method across foundations, dynasties, family offices, and the private structures that hold wealth, not just the public programs that spend it. Start there for the whole map, or here for the government's own ledger, program by program.
This series is informational and journalistic. Every load-bearing figure is documented in the fact-check section at the foot of each linked piece, with links to the original report, statute, or filing. Contested claims are labeled as contested, and where a program can be honestly described as both wasteful and worth it, both readings are shown.